Barbosa, C., Rodrigues, C. F., Lončar, N., Martins, L. O., Todorovic, S., & Silveira, C. M. (2024). Spectroelectrochemistry for determination of the redox potential in heme enzymes: Dye-decolorizing peroxidases. BBA Advances, 5, 100112. https://doi.org/10.1016/j.bbadva.2023.100112
Calisto, F., Todorovic,S. , Louro,R.O. & Pereira,M.M (2023). Exploring substrate interaction in respiratory alternative complex III from Rhodothermus marinus.Biochimica et Biophysica Acta (BBA) - Bioenergetics,1864(3),148983, https://doi.org/10.1016/j.bbabio.2023.148983.
Seck, A., De Bonis, S., Stelter, M., Ökvist, M., Senarisoy, M., Hayek, M. R., Le Roy, A., Martin, L., Saint-Pierre, C., Silveira, C. M., Gasparutto, D., Todorovic, S., Ravanat, J.-L., & Timmins, J. (2023). Structural and functional insights into the activation of the dual incision activity of uvrc, a key player in bacterial ner. Nucleic Acids Research, 51(6), 2931–2949. https://doi.org/10.1093/nar/gkad108
Pelmenschikov, V., Ferreira, D., Venceslau, S. S., Hildebrandt, P., Pereira, I. A. C., & Todorovic, S. (2023). Substrate-Dependent Conformational Switch of the Noncubane [4Fe-4S] Cluster in Heterodisulfide Reductase HdrB. Journal of the American Chemical Society, 145(1), 7–11. https://doi.org/10.1021/jacs.2c10885
Moe, E., Silveira, C. M., Zuccarello, L., Rollo, F., Stelter, M., de Bonis, S., Kulka-Peschke, C., Katz, S., Hildebrandt, P., Zebger, I., Timmins, J., & Todorovic, S. (2022). Human endonuclease III/NTH1: focusing on the [4Fe–4S] cluster and the N-terminal domain. Chemical Communications, 58(90), 12568–12571. https://doi.org/10.1039/d2cc03643f
Ji, Y., Wei, L., Da, A., Stark, H., Hagedoorn, P.-L., Ciofi-Baffoni, S., Cowley, S. A., Louro, R. O., Todorovic, S., Mroginski, M. A., Nicolet, Y., Roessler, M. M., le Brun, N. E., Piccioli, M., James, W. S., Hagen, W. R., & Ebrahimi, K. H. (2022). Radical-SAM dependent nucleotide dehydratase (SAND), rectification of the names of an ancient iron-sulfur enzyme using NC-IUBMB recommendations. Frontiers in Molecular Biosciences, 9. https://doi.org/10.3389/fmolb.2022.1032220
Rollo, F., Borges, P. T., Silveira, C. M., Rosa, M. T. G., Todorovic, S., & Moe, E. (2022). Disentangling Unusual Catalytic Properties and the Role of the [4Fe-4S] Cluster of Three Endonuclease III from the Extremophile D. radiodurans. Molecules, 27(13). https://doi.org/10.3390/molecules27134270
Caserta, G.; Zuccarello, L.; Barbosa, C.; Silveira, C. M.; Moe, E.; Katz, S.; Hildebrandt, P.; Zebger, I.; Todorovic, S. (2022). Unusual structures and unknown roles of Fes clusters in metalloenzymes seen from a resonance Raman Spectroscopic Perspective. Coordination Chemistry Reviews, 452, 214287.https://doi.org/10.1016/j.ccr.2021.214287
Zitare, U. A.; Habib, M. H.; Rozeboom, H.; Mascotti, M. L.; Todorovic, S.; Fraaije, M. W. (2021). Mutational and structural analysis of an ancestral fungal dye‐decolorizing peroxidase. The FEBS Journal, 288(11), 3602–3618. https://doi.org/10.1111/febs.15687
Püschmann, J.; Mahor, D.; de Geus, D. C.; Strampraad, M. J.;Srour, B.; Hagen, W. R., Todorovic, S.; Hagedoorn, P.L. (2021). Unique biradical intermediate in the mechanism of the heme enzyme chlorite dismutase. ACS Catalysis, 14533–14544. https://doi.org/10.1021/acscatal.1c03432
Silveira, C.M.; Zuccarello, L.; Barbosa, C.; Caserta, G.; Zebger, I.; Hildebrandt, P.; Todorovic, S. (2021) Molecular Details on Multiple Cofactor Containing Redox Metalloproteins Revealed by Infrared and Resonance Raman Spectroscopies. Molecules , 26, 4852. https://doi.org/10.3390/molecules26164852
Zuccarello, L.; Barbosa, C.; Galdino, E.; Lončar, N.; Silveira, C.M.; Fraaije, M.W.; Todorovic, S. (2021) SERR Spectroelectrochemistry as a Guide for Rational Design of DyP-Based Bioelectronics Devices. Int. J. Mol. Sci. , 22, 7998. https://doi.org/10.3390/ijms22157998
Zuccarello, L.; Barbosa, C.; Todorovic, S. & Silveira, C.M. (2021) Electrocatalysis by Heme Enzymes-Applications in Biosensing. Catalysts, 11, 218. https://doi.org/10.3390/catal11020218
Silveira, C. M., Moe, E., Fraaije, M., Martins, L. O., & Todorovic, S. (2020). Resonance Raman view of the active site architecture in bacterial DyP-type peroxidases. RSC Advances, 10(19), 11095–11104. https://doi.org/10.1039/D0RA00950D
Barbosa, C., Silveira, C. M., Silva, D., Brissos, V., Hildebrandt, P., Martins, L. O., & Todorovic, S. (2020). Immobilized dye-decolorizing peroxidase (DyP) and directed evolution variants for hydrogen peroxide biosensing. Biosensors and Bioelectronics, 153. https://doi.org/10.1016/j.bios.2020.112055
Todorovic, S. (2019). Raman Biospectroscopy and Imaging. In A. S. Pereira, P. Tavares, & P. Limão-Vieira (Eds.), Radiation in Bioanalysis (Vol. 8, pp. 111–145). Springer International Publishing. https://doi.org/10.1007/978-3-030-28247-9
Todorovic, S., & Teixeira, M. (2018). Resonance Raman spectroscopy of Fe–S proteins and their redox properties. In Journal of Biological Inorganic Chemistry (Vol. 23, Issue 4, pp. 647–661). Springer Verlag. https://doi.org/10.1007/s00775-018-1533-0
Honarmand Ebrahimi, K., Silveira, C., & Todorovic, S. (2018). Evidence for the synthesis of an unusual high spin ( S = 7/2) [Cu–3Fe–4S] cluster in the radical-SAM enzyme RSAD2 (viperin). Chemical Communications, 54(62), 8614–8617. https://doi.org/10.1039/C8CC03565B
Moe, E., Rollo, F., Silveira, C. M., Sezer, M., Hildebrandt, P., & Todorovic, S. (2018). Spectroelectrochemical insights into structural and redox properties of immobilized endonuclease III and its catalytically inactive mutant. Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy, 188, 149–154. https://doi.org/10.1016/j.saa.2017.06.050
Silveira, C. M., Castro, M. A., Dantas, J. M., Salgueiro, C., Murgida, D. H., & Todorovic, S. (2017). Structure, electrocatalysis and dynamics of immobilized cytochrome PccH and its microperoxidase. Physical Chemistry Chemical Physics, 19(13), 8908–8918. https://doi.org/10.1039/c6cp08361g
Gouveia, Z., Carlos, A. R., Yuan, X., Aires-da-Silva, F., Stocker, R., Maghzal, G. J., Leal, S. S., Gomes, C. M., Todorovic, S., Iranzo, O., Ramos, S., Santos, A. C., Hamza, I., Gonçalves, J., & Soares, M. P. (2017). Characterization of plasma labile heme in hemolytic conditions. The FEBS Journal, 284(19), 3278–3301. https://doi.org/10.1111/febs.14192
Todorovic, S., & Murgida, D. H. (2016). Surface-Enhanced Raman Scattering of Biological Materials. In Encyclopedia of Analytical Chemistry (pp. 1–29). John Wiley & Sons, Ltd. https://doi.org/10.1002/9780470027318.a9574
Santos, L., Silveira, C. M., Elangovan, E., Neto, J. P., Nunes, D., Pereira, L., Martins, R., Viegas, J., Moura, J. J. G., Todorovic, S., Almeida, M. G., & Fortunato, E. (2016). Synthesis of WO3 nanoparticles for biosensing applications. Sensors and Actuators, B: Chemical, 223, 186–194. https://doi.org/10.1016/j.snb.2015.09.046
Maiti, B. K., Maia, L. B., Silveira, C. M., Todorovic, S., Carreira, C., Carepo, M. S. P., Grazina, R., Moura, I., Pauleta, S. R., & Moura, J. J. G. (2015). Incorporation of molybdenum in rubredoxin: models for mononuclear molybdenum enzymes. Journal of Biological Inorganic Chemistry, 20(5), 821–829. https://doi.org/10.1007/s00775-015-1268-0
Moe, E., Sezer, M., Hildebrandt, P., & Todorovic, S. (2015). Surface enhanced vibrational spectroscopic evidence for an alternative DNA-independent redox activation of endonuclease III. Chemical Communications, 51(15), 3255–3257. https://doi.org/10.1039/c4cc09498k
Todorovic, S., Hildebrandt, P., & Martins, L. O. (2015). Surface enhanced resonance Raman detection of a catalytic intermediate of DyP-type peroxidase. Physical Chemistry Chemical Physics, 17(18), 11954–11957. https://doi.org/10.1039/c5cp01283j
Mendes, S., Catarino, T., Silveira, C., Todorovic, S., & Martins, L. O. (2015). The catalytic mechanism of A-type dye-decolourising peroxidase BsDyP: neither aspartate nor arginine is individually essential for peroxidase activity. Catalysis Science and Technology, 5(12), 5196–5207. https://doi.org/10.1039/c5cy00478k
Silveira, C. M., Quintas, P. O., Moura, I., Moura, J. J. G., Hildebrandt, P., Almeida, M. G., & Todorovic, S. (2015). SERR Spectroelectrochemical Study of Cytochrome cd1 Nitrite Reductase Co-Immobilized with Physiological Redox Partner Cytochrome c552 on Biocompatible Metal Electrodes. PLOS ONE, 10(6), e0129940. https://doi.org/10.1371/journal.pone.0129940
Mendes, S., Brissos, V., Gabriel, A., Catarino, T., Turner, D. L., Todorovic, S., & Martins, L. O. (2015). An integrated view of redox and catalytic properties of B-type PpDyP from Pseudomonas putida MET94 and its distal variants. Archives of Biochemistry and Biophysics, 574, 99–107. https://doi.org/10.1016/j.abb.2015.03.009
Nobre, L. S., Garcia-Serres, R., Todorovic, S., Hildebrandt, P., Teixeira, M., Latour, J.-M., & Saraiva, L. M. (2014). Escherichia coli RIC Is Able to Donate Iron to Iron-Sulfur Clusters. PLoS ONE, 9(4), e95222. https://doi.org/10.1371/journal.pone.0095222
Oliveira, F. S., Pereiro, A. B., Araújo, J. M. M., Bernardes, C. E. S., Canongia Lopes, J. N., Todorovic, S., Feio, G., Almeida, P. L., Rebelo, L. P. N., & Marrucho, I. M. (2013). High ionicity ionic liquids (HIILs): Comparing the effect of ethylsulfonate and ethylsulfate anions. Physical Chemistry Chemical Physics, 15(41), 18138–18147. https://doi.org/10.1039/c3cp52642a
Sezer, M., Santos, A., Kielb, P., Pinto, T., Martins, L. O., & Todorovic, S. (2013). Distinct Structural and Redox Properties of the Heme Active Site in Bacterial Dye Decolorizing Peroxidase-Type Peroxidases from Two Subfamilies: Resonance Raman and Electrochemical Study. Biochemistry, 52(18), 3074–3084. https://doi.org/10.1021/bi301630a
Sezer, M., Genebra, T., Mendes, S., Martins, L. O., & Todorovic, S. (2012). A DyP-type peroxidase at a bio-compatible interface: Structural and mechanistic insights. Soft Matter, 8(40), 10314–10321. https://doi.org/10.1039/c2sm26310f
Todorovic, S., Rodrigues, M. L., Matos, D., & Pereira, I. A. C. (2012). Redox Properties of Lysine- and Methionine-Coordinated Hemes Ensure Downhill Electron Transfer in NrfH 2 A 4 Nitrite Reductase. The Journal of Physical Chemistry B, 116(19), 5637–5643. https://doi.org/10.1021/jp301356m
Quintas, P. O., Catarino, T., Todorovic, S., & Turner, D. L. (2011). Highly Selective Ligand Binding by Methylophilus methylotrophus Cytochrome c ′′. Biochemistry, 50(25), 5624–5632. https://doi.org/10.1021/bi200480a
Pinto, A. F., Todorovic, S., Hildebrandt, P., Yamazaki, M., Amano, F., Igimi, S., Romão, C. V, & Teixeira, M. (2011). Desulforubrerythrin from Campylobacter jejuni, a novel multidomain protein. Journal of Biological Inorganic Chemistry : JBIC : A Publication of the Society of Biological Inorganic Chemistry, 16(3), 501–510. https://doi.org/10.1007/s00775-010-0749-4
Molinas, M. F., De Candia, A., Szajnman, S. H., Rodríguez, J. B., Martí, M., Pereira, M., Teixeira, M., Todorovic, S., & Murgida, D. H. (2011). Electron transfer dynamics of Rhodothermus marinus caa 3 cytochrome c domains on biomimetic films. Physical Chemistry Chemical Physics, 13(40), 18088–18098. https://doi.org/10.1039/c1cp21925a
Catarino, T., Pessanha, M., De Candia, A. G., Gouveia, Z., Fernandes, A. P., Pokkuluri, P. R., Murgida, D., Marti, M. A., Todorovic, S., & Salgueiro, C. A. (2010). Probing the Chemotaxis Periplasmic Sensor Domains from Geobacter sulfurreducens by Combined Resonance Raman and Molecular Dynamic Approaches: NO and CO Sensing. The Journal of Physical Chemistry B, 114(34), 11251–11260. https://doi.org/10.1021/jp1029882
Martins, G., Rodrigues, L., Cunha, F. M., Matos, D., Hildebrandt, P., Murgida, D. H., Pereira, I. A. C., & Todorovic, S. (2010). Substrate Binding to a Nitrite Reductase Induces a Spin Transition. The Journal of Physical Chemistry B, 114(16), 5563–5566. https://doi.org/10.1021/jp9118502
Carapeto, A. P., Serro, A. P., Nunes, B. M. F., Martins, M. C. L., Todorovic, S., Duarte, M. T., André, V., Colaço, R., & Saramago, B. (2010). Characterization of two DLC coatings for joint prosthesis: The role of albumin on the tribological behavior. Surface and Coatings Technology, 204(21–22), 3451–3458. https://doi.org/10.1016/j.surfcoat.2010.04.022
Grein, F., Venceslau, S. S., Schneider, L., Hildebrandt, P., Todorovic, S., Pereira, I. A. C., & Dahl, C. (2010). DsrJ, an essential part of the DsrMKJOP transmembrane complex in the purple sulfur bacterium Allochromatium vinosum, is an unusual triheme cytochrome c. Biochemistry, 49(38), 8290–8299. https://doi.org/10.1021/bi1007673
Fernandes, A. T., Damas, J. M., Todorovic, S., Huber, R., Baratto, M. C., Pogni, R., Soares, C. M., & Martins, L. O. (2010). The multicopper oxidase from the archaeon Pyrobaculum aerophilum shows nitrous oxide reductase activity. The FEBS Journal, 277(15), 3176–3189. https://doi.org/10.1111/j.1742-4658.2010.07725.x
Chen, Z., Durão, P., Silva, C. S., Pereira, M. M., Todorovic, S., Hildebrandt, P., Bento, I., Lindley, P. F., & Martins, L. O. (2010). The role of Glu498 in the dioxygen reactivity of CotA-laccase from Bacillus subtilis. Dalton Transactions, 39(11), 2875–2882. https://doi.org/10.1039/b922734b
Silveira, C. M., Gomes, S. P., Araújo, A. N., Montenegro, M. C. B. S. M., Todorovic, S., Viana, A. S., Silva, R. J. C., Moura, J. J. G., & Almeida, M. G. (2010). An efficient non-mediated amperometric biosensor for nitrite determination. Biosensors and Bioelectronics, 25(9), 2026–2032. https://doi.org/10.1016/j.bios.2010.01.031
Nobre, L. S., Todorovic, S., Tavares, A. F. N., Oldfield, E., Hildebrandt, P., Teixeira, M., & Saraiva, L. M. (2010). Binding of azole antibiotics to Staphylococcus aureus flavohemoglobin increases intracellular oxidative stress. Journal of Bacteriology, 192(6), 1527–1533. https://doi.org/10.1128/JB.01378-09
Murgida, D. H., Hildebrandt, P., & Todorovic, S. (2010). Immobilized Redox Proteins: Mimicking Basic Features of Physiological Membranes and Interfaces. In Biomimetics Learning from Nature (pp. 21–48). https://doi.org/10.5772/8778
Bandeiras, T. M., Refojo, P. N., Todorovic, S., Murgida, D. H., Hildebrandt, P., Bauer, C., Pereira, M. M., Kletzin, A., & Teixeira, M. (2009). The cytochrome ba complex from the thermoacidophilic crenarchaeote Acidianus ambivalens is an analog of bc(1) complexes. Biochimica et Biophysica Acta, 1787(1), 37–45. https://doi.org/10.1039/b815489a
Todorovic, S., Rodrigues, J. V, Pinto, A. F., Thomsen, C., Hildebrandt, P., Teixeira, M., & Murgida, D. H. (2009). Resonance Raman study of the superoxide reductase from Archaeoglobus fulgidus, E12 mutants and a “natural variant”. Physical Chemistry Chemical Physics : PCCP, 11(11), 1809–1815. https://doi.org/10.1039/b815489a